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Identifiable grains: 3,960 - 475 = <<3960-475=3485>>3,485.
Successful alignments: 2,400,000 - 132,000 = <<2400000-132000=2268000>>2,268,000.
Final credible reads: 2,268,000 - 141,750 = <<2268000-141750=2126250>>2,126,250.
A palynologist uses a statistical model to estimate past tree cover. Her dataset includes 9,600 pollen counts. After normalization, 22% are flagged as outliers. From the valid counts, 35% are dominated by oak pollen. How many oak pollen counts are in the dataset?
A bioinformatician analyzes variant calls from 140,000 SNPs. 9% are removed for low coverage. Of the remaining, 5.5% are large indels and excluded. How many SNPs remain for downstream analysis?
Remaining SNPs: 127,400 - 6,997 = <<127400-6997=120403>>120,403.
A palynologist studies 15 core samples, each with 240 pollen grains counted. Due to fragmentation, 8% of all grains are lost in counting. If 60% of the identifiable grains are from deciduous trees, how many deciduous pollen grains are identified?
Identifiable grains: 3,600 - 288 = <<3600-288=3312>>3,312.
Remaining: 85,000 - 11,900 = <<85000-11900=73100>>73,100.
Passing sequences: 73,100 - 7,310 = <<73100-7310=65790>>65,790.